install.packages("openssl") install.packages("credentials") install.packages("httr") install.packages("gert") install.packages("gh") install.packages("usethis") install.packages("covr") install.packages("xml2") install.packages("roxygen2") install.packages("rversions") install.packages("devtools") devtools::install_github("dvera/conifur") devtools::install_github("dvera/gyro") devtools::install_github("dvera/converge") devtools::install_github("dvera/travis") devtools::install_github("dvera/genmat") devtools::install_bioc("genefilter") devtools::install_bioc("ballgown") install.packages("BiocManager") BiocManager::install("edgeR") BiocManager::install("S4Vectors") BiocManager::install("GenomicRanges") BiocManager::install("rhdf5") BiocManager::install("biomaRt")