A

B

C

D

E

F

G

H

I

J

K

1

short name (gene_symbol)

long name (gene_name)

gene_model

assembly_version

locus_type

chr

start

end

short name

synonyms (via maizegdb)

description via maizegdb

2

a1

anthocyaninless1

GRMZM2G026930

B73 RefGen_v3

Gene

Chr3

216386031

216387865

a1

a1, anthocyaninless1, bnl(a1), gsy38(A1), npi467, npi51, umc199(a1)

colorless aleurone, green or brown plant; brown pericarp with P1-rr

3

a2

anthocyaninless2

GRMZM2G345717

B73 RefGen_v3

Gene

Chr5

66136522

66139360

a2

a2, anthocyaninless2

like a1, but red pericarp with P1-rr

4

a4

anthocyaninless4

GRMZM2G013726

B73 RefGen_v3

Gene

Chr8

145645771

145647394

a4

A1*, a1(6), a4, anthocyaninless4, bnl17.01, umc189a, umc189(a1), umc189a(a1)

in tissues analyzed-cob, husks, kernel; function of gene product not known (Bernhardt et al. 1998)

5

aaa1

adenosylmethionine aminotransferase1

GRMZM5G817886

B73 RefGen_v3

Gene

Chr2

10216755

10222011

aaa1

aaa1, adenosylmethionine aminotransferase1, PCO069643, pco069643(115), uaz113, uaz113(gfu)

endosperm cDNA 5C01E09 (uaz113) similar to bacterial biotin synthesis enzyme

6

aap1

acylaminoacyl-peptidase1

GRMZM2G120302

B73 RefGen_v3

Gene

Chr9

7579688

7587102

aap1

aap1, acylaminoacyl-peptidase1, PCO061185, uaz5c09a06(gfu)

endosperm cDNA 5C09A06, similar to acylaminoacyl-peptidase

7

aasr1

abscisic acid stress ripening1

GRMZM2G136910

B73 RefGen_v3

Gene

Chr10

8852553

8853933

aasr1

csu103(hupm), csu250a, csu250a(aba), csuh103, gnp_L346, gpm930, hhp1, IDP9044, phi059, umc1582, umc364(gfu), ZmAsr1

protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044

8

aasr2

abscisic acid stress ripening2

GRMZM5G854138

B73 RefGen_v3

Gene

Chr2

139700113

139701207

aasr2

aasr2, abscisic acid stress ripening2, csu850, csu851a, csuh00850, csuh850, ZmASR2

9

aasr3

abscisic acid stress ripening3

GRMZM2G044132

B73 RefGen_v3

Gene

Chr2

54473360

54474872

aasr3

aasr3, abscisic acid stress ripening3, pco156020, umc2088, ZmASR3

10

aasr5

abscisic acid stress ripening5

GRMZM2G052100

B73 RefGen_v3

Gene

Chr10

116077391

116078438

aasr5

aasr5, aba5, abscisic acid stress ripening5, AY109698, CL4149_1, IDP2437, ZmASR5

11

aasr6

abscisic acid stress ripening6

GRMZM2G057841

B73 RefGen_v3

Gene

Chr5

171162247

171162872

aasr6

aasr6, aba6, abscisic acid stress ripening6, abscisic stress-ripening protein 3-like, TIDP9149, ZmASR6

12

aasr7

abscisic acid stress ripening7

GRMZM2G014797

B73 RefGen_v3

Gene

Chr3

65662114

65662673

aasr7

aasr7, aba7, abscicic acid stress ripening7, ZmASR7-1

13

aasr8

abscisic acid stress ripening8

GRMZM2G314075

B73 RefGen_v3

Gene

Chr3

65665421

65666059

aasr8

aasr8, aba8, abscisic acid stress ripening8, ZmASR7-2

14

aasr9

abscisic acid stress ripening9

GRMZM2G383699

B73 RefGen_v3

Gene

Chr3

65739867

65740452

aasr9

aasr9, aba9, abscisic acid stress ripening9, IDP6829, ZmASR7-3

15

abc1

ABC(yeast) homolog1

GRMZM2G157369

B73 RefGen_v3

Gene

Chr4

171570493

171575379

abc1

abc1, ABC(yeast) homolog1, CL26230_1, CL26230_1(329), <i>a</i>ctivator of cytochrom

<i>bc1</i> complex (ABC1) kinases, uaz263, uaz263(gfu), uaz5c06a01

endosperm cDNA 5C05H02(uaz263) similar to yeast ABC1 protein

16

abcf1

ABC family1

GRMZM2G105570

B73 RefGen_v3

Gene

Chr2

229565962

229569990

abcf1

abcf1, ATP-binding cassette transporterF1, PCO135043

transmembrane transport

17

abcg11

ABC transporter G family member 11

GRMZM2G177812

B73 RefGen_v3

Gene

Chr2

24498593

24503843

abcg11

abcg11, ATP-binding cassette transporterG11, gnp_QCF18c07a, gnp_QCF5a04, gpm627a, gpm636, PCO068684

cassette transporter; cutin transport to extracellular matrix. Ortholog of Arabidopsis ABCG11/COF1/WBC11. Plasma membrane-localized ATP-binding cassette transporter; cutin

18

abh1

abscisic acid 8'-hydroxylase1

GRMZM2G179147

B73 RefGen_v3

Gene

Chr5

200705194

200707991

abh1

ABA8ox1a, abh1, CYP707A3, PCO110502(446), PCO110502b

19

abh2

abscisic acid 8'-hydroxylase2

GRMZM2G126505

B73 RefGen_v3

Gene

Chr4

159692123

159694949

abh2

ABA8ox1b, abh2, bnl29(pds2), PCO110502a, umc1299

20

abh3

abscisic acid 8'-hydroxylase3

GRMZM2G105954

B73 RefGen_v3

Gene

Chr4

57970815

57976241

abh3

ABA8ox2, abh3, abscisic acid 8'-hydroxylase3

21

abh4

abscisic acid 8'-hydroxylase4

GRMZM2G065928

B73 RefGen_v3

Gene

Chr7

126008605

126011545

abh4

ABA8Ox3a, abh4, abscisic acid 8'-hydroxylase4

22

abh5

abscisic acid 8'-hydroxylase5

GRMZM2G002142

B73 RefGen_v3

Gene

Chr2

186842961

186845670

abh5

ABA8Ox3b, abh5, abscisic acid 8'-hydroxylase5

23

abi10

ABI3-VP1-transcription factor 10

AC193767.3_FG003

B73 RefGen_v3

Gene

Chr10

148761047

148762234

abi10

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

24

abi11

ABI3-VP1-transcription factor 11

GRMZM2G065478

B73 RefGen_v3

Gene

Chr1

165089891

165092452

abi11

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

25

abi12

ABI3-VP1-transcription factor 12

GRMZM2G102059

B73 RefGen_v3

Gene

Chr2

15033794

15035837

abi12

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

26

abi13

ABI3-VP1-transcription factor 13

GRMZM2G018336

B73 RefGen_v3

Gene

Chr5

28659785

28661138

abi13

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

27

abi14

ABI3-VP1-transcription factor 14

GRMZM2G106673

B73 RefGen_v3

Gene

Chr4

26518896

26526586

abi14

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

28

abi15

ABI3-VP1-transcription factor 15

GRMZM2G361376

B73 RefGen_v3

Gene

Chr3

232108213

232112166

abi15

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

29

abi16

ABI3-VP1-transcription factor 16

GRMZM2G024948

B73 RefGen_v3

Gene

Chr5

196729019

196731042

abi16

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

30

abi17

ABI3-VP1-transcription factor 17

GRMZM2G017187

B73 RefGen_v3

Gene

Chr2

48136356

48141220

abi17

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

31

abi18

ABI3-VP1-transcription factor 18

GRMZM2G019956

B73 RefGen_v3

Gene

Chr5

18152128

18154870

abi18

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

32

abi19

ABI3-VP1-transcription factor 19

GRMZM2G035701

B73 RefGen_v3

Gene

Chr8

154216668

154220485

abi19

ZmAFL2

and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

33

abi2

ABI3-VP1-transcription factor 2

GRMZM2G018485

B73 RefGen_v3

Gene

Chr10

134624802

134626574

abi2

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

34

abi20

ABI3-VP1-transcription factor 20

GRMZM2G313737

B73 RefGen_v3

Gene

Chr8

155378968

155387313

abi20

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

35

abi21

ABI3-VP1-transcription factor 21

GRMZM2G126194

B73 RefGen_v3

Gene

Chr10

109396005

109397093

abi21

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

36

abi22

ABI3-VP1-transcription factor 22

GRMZM2G008356

B73 RefGen_v3

Gene

Chr7

157708697

157716763

abi22

abi22, ABI3-VP1-transcription factor 22, hca1, PCO071471, pco071471(576), uaz199, uaz5c04c07, ZmAFL1

assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

37

abi23

ABI3-VP1-transcription factor 23

GRMZM2G180168

B73 RefGen_v3

Gene

Chr10

78160467

78161649

abi23

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

38

abi24

ABI3-VP1-transcription factor 24

GRMZM2G088413

B73 RefGen_v3

Gene

Chr1

254478910

254482162

abi24

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

39

abi25

ABI3-VP1-transcription factor 25

GRMZM2G344521

B73 RefGen_v3

Gene

Chr1

254590445

254594484

abi25

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

40

abi26

ABI3-VP1-transcription factor 26

GRMZM2G423393

B73 RefGen_v3

Gene

Chr10

67375028

67375918

abi26

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

41

abi27

ABI3-VP1-transcription factor 27

GRMZM2G123461

B73 RefGen_v3

Gene

Chr1

180722884

180724089

abi27

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

42

abi28

ABI3-VP1-transcription factor 28

GRMZM2G109879

B73 RefGen_v3

Gene

Chr2

103802791

103809253

abi28

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

43

abi29

ABI3-VP1-transcription factor 29

GRMZM2G084173

B73 RefGen_v3

Gene

Chr6

68219540

68224677

abi29

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

44

abi3

ABI3-VP1-transcription factor 3

GRMZM2G149940

B73 RefGen_v3

Gene

Chr2

1684944

1691150

abi3

abi3, ABI3-VP1-transcription factor 3, ZmAFL4

and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

45

abi30

ABI3-VP1-transcription factor 30

GRMZM2G088427

B73 RefGen_v3

Gene

Chr1

254487577

254489679

abi30

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

46

abi31

ABI3-VP1-transcription factor 31

GRMZM2G177244

B73 RefGen_v3

Gene

Chr3

165897795

165900405

abi31

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

47

abi32

ABI3-VP1-transcription factor 32

GRMZM2G158162

B73 RefGen_v3

Gene

Chr7

173216702

173223537

abi32

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

48

abi33

ABI3-VP1-transcription factor 33

GRMZM2G065538

B73 RefGen_v3

Gene

Chr8

152001159

152002001

abi33

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

49

abi34

ABI3-VP1-transcription factor 34

GRMZM2G125095

B73 RefGen_v3

Gene

Chr1

83653655

83654919

abi34

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

50

abi35

ABI3-VP1-transcription factor 35

GRMZM5G834874

B73 RefGen_v3

Gene

Chr5

181252639

181256424

abi35

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

A

B

C

D

E

F

G

H

I

J

K

1

short name (gene_symbol)

long name (gene_name)

gene_model

assembly_version

locus_type

chr

start

end

short name

synonyms (via maizegdb)

description via maizegdb

51

abi36

ABI3-VP1-transcription factor 36

GRMZM2G001048

B73 RefGen_v3

Gene

Chr4

14748387

14751790

abi36

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

52

abi37

ABI3-VP1-transcription factor 37

GRMZM2G027253

B73 RefGen_v3

Gene

Chr6

56611496

56612170

abi37

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

53

abi38

ABI3-VP1-transcription factor 38

GRMZM2G142999

B73 RefGen_v3

Gene

Chr9

125822461

125823598

abi38

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

54

abi39

ABI3-VP1-transcription factor 39

GRMZM2G172621

B73 RefGen_v3

Gene

Chr2

217651494

217673563

abi39

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

55

abi4

ABI3-VP1-transcription factor 4

GRMZM2G098063

B73 RefGen_v3

Gene

Chr1

254460346

254462461

abi4

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

56

abi40

ABI3-VP1-transcription factor 40

GRMZM2G328742

B73 RefGen_v3

Gene

Chr4

189990840

189992872

abi40

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

57

abi41

ABI3-VP1-transcription factor 41

GRMZM5G805685

B73 RefGen_v3

Gene

Chr10

6074814

6076964

abi41

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

58

abi42

ABI3-VP1-transcription factor 42

GRMZM2G098443

B73 RefGen_v3

Gene

Chr8

96201480

96202346

abi42

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

59

abi43

ABI3-VP1-transcription factor 43

GRMZM2G028794

B73 RefGen_v3

Gene

Chr9

150250653

150252625

abi43

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

60

abi44

ABI3-VP1-transcription factor 44

GRMZM2G405170

B73 RefGen_v3

Gene

Chr10

44129684

44130359

abi44

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

61

abi45

ABI3-VP1-transcription factor 45

GRMZM2G174610

B73 RefGen_v3

Gene

Chr6

154832684

154837678

abi45

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

62

abi46

ABI3-VP1-transcription factor 46

GRMZM2G065496

B73 RefGen_v3

Gene

Chr1

165085207

165088108

abi46

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

63

abi47

ABI3-VP1-transcription factor 47

GRMZM2G125596

B73 RefGen_v3

Gene

Chr4

195559254

195562953

abi47

ZmAFL6

assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

64

abi48

ABI3-VP1-transcription factor 48

GRMZM2G111123

B73 RefGen_v3

Gene

Chr3

221999802

222002668

abi48

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

65

abi49

ABI3-VP1-transcription factor 49

GRMZM2G405699

B73 RefGen_v3

Gene

Chr6

267970

270851

abi49

ABI3-VP1-transcription factor 49, abi49, ZmAFL5

and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

66

abi5

ABI3-VP1-transcription factor 5

GRMZM2G320754

B73 RefGen_v3

Gene

Chr5

18103497

18105325

abi5

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

67

abi50

ABI3-VP1-transcription factor 50

GRMZM2G102938

B73 RefGen_v3

Gene

Chr6

57753651

57755275

abi50

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

68

abi51

ABI3-VP1-transcription factor 51

GRMZM2G173321

B73 RefGen_v3

Gene

Chr10

65200137

65213038

abi51

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

69

abi6

ABI3-VP1-transcription factor 6

GRMZM2G160224

B73 RefGen_v3

Gene

Chr1

25616688

25619269

abi6

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

70

abi7

ABI3-VP1-transcription factor 7

GRMZM2G109480

B73 RefGen_v3

Gene

Chr1

17698816

17700801

abi7

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

71

abi8

ABI3-VP1-transcription factor 8

GRMZM2G082227

B73 RefGen_v3

Gene

Chr1

4541352

4542978

abi8

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

72

abi9

ABI3-VP1-transcription factor 9

GRMZM2G522066

B73 RefGen_v3

Gene

Chr1

165099882

165101147

abi9

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

73

abil1

abelson interactor1-like protein1

GRMZM5G832362

B73 RefGen_v3

Gene

Chr3

226961580

226962818

abil1

ABI-1-like protein, abil1

74

abk1

aurora b kinase1

GRMZM2G132116

B73 RefGen_v3

Gene

Chr3

6793085

6797402

abk1

abk1

75

abp1

auxin binding protein1

GRMZM2G116204

B73 RefGen_v3

Gene

Chr3

133916691

133921441

abp1

abp1, aux311, auxin binding protein1, axr1

putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)

76

abp4

auxin binding protein homolog4

GRMZM2G064371

B73 RefGen_v3

Gene

Chr10

26670823

26673897

abp4

abp4, auxin binding protein homolog4, CL1150_1, cl1150_1(726), Zm-ERabp4

putative auxin receptor, genomic clone, promoter-reporter gene fusion functional in maize leaf protoplasts. cDNA ZmERabp4 probes one band on Southerns

77

abph1

aberrant phyllotaxy1

GRMZM2G035688

B73 RefGen_v3

Gene

Chr2

28104302

28109281

abph1

aberrant phyllotaxy1, abph1, abphyl, response regulator3, rs129036669, rs131175414,

rs131175415, rs131175416, rs131175417, ss196415049, ss196415051, ZmOrphan266, ZmRR3 decussate leaves and ear shoots (opposite at nodes) frequent; variable, recessive

78

AC199769 GRMZM2G333861 B73 RefGen_v3 BAC Chr8 163203515 163205870 AC199769 c0274C20

79

AC210173.4_FG005 AC210173.4_FG005 B73 RefGen_v3 Gene Chr1 224102016 224105678 AC210173.4_Fcytochrome P450 84A1-like, ZmF5H

80

acb1

Acyl-CoA-binding protein1

GRMZM2G079908

B73 RefGen_v3

Gene

Chr10

76415905

76418574

acb1

acb1, csu613(acb), PCO107996af, rgpr1908b(acb)

81

acc1

acetyl-coenzyme A carboxylase1

AC197672.3_FG002

B73 RefGen_v3

Gene

Chr10

98149608

98168566

acc1

acc1, acc2, acc*-pA4, acc*-U90128, acetyl CoA carboxlase*-pA4, acetyl-CoA carboxylase A candidate, acetyl-CoA carboxylase II, CL2223_1a, gnp_QCG7e03, gpm656, MR3, pA4

tissue-culture selected resistance to cyclohexanedione (e.g., sethoxydim) and aryloxy phenoxypropionate (e.g., haloxyfop) herbicides; encodes acetyl-CoA carboxylase

82

acc2

acetyl-CoA carboxylase2

GRMZM5G858094

B73 RefGen_v3

Gene

Chr2

83024018

83036516

acc2

acc2, ACCase II, accB, acc*-pA3, Acc-S2, acc*-U19183, acetyl CoA carboxylase*-pA3, acetyl- coenzyme A carboxylase I, CL2223_1b, MR1, MR2, pA3, umn1, umn1(acc), umng1, umng2

graminicide (e.g., sethoxydim, haloxyfop) resistance; encodes acetyl-CoA carboxylase

83

acco1

1-aminocyclopropane-1-carboxylate oxid GRMZM2G164883

B73 RefGen_v3

Gene

Chr6

104114291

104115533

acco1

acco1, ZmACOA

84

acco15

1-aminocyclopropane-1-carboxylate oxid GRMZM2G166639

B73 RefGen_v3

Gene

Chr10

90488171

90489769

acco15

acco15, ZmACO15

85

acco2

1-aminocyclopropane-1-carboxylate oxid GRMZM2G007249

B73 RefGen_v3

Gene

Chr7

124313854

124315851

acco2

acco2, cl955_1, cl955_1(563), ZmACOB

86

acco20

1-aminocyclopropane-1-carboxylate oxid GRMZM2G126732

B73 RefGen_v3

Gene

Chr4

177657802

177660210

acco20

acco20, ACC oxidase20, ACO20, ZmACO20

87

acco3

1-aminocyclopropane-1-carboxylate oxid GRMZM2G166616

B73 RefGen_v3

Gene

Chr10

90480467

90481799

acco3

acco3, ZmACOC

88

acco31

1-aminocyclopropane-1-carboxylate oxid GRMZM2G072529

B73 RefGen_v3

Gene

Chr10

90301775

90303069

acco31

acco31, ZmACO31

89

1-aminocyclopropane-1-carboxylate oxidase 1, acco35, ACC oxidase35, PCO145638(452),

acco35 1-aminocyclopropane-1-carboxylate oxid GRMZM2G052422 B73 RefGen_v3 Gene Chr5 210825846 210828416 acco35 PCO145638b, ZmACO35

90

acco4

1-aminocyclopropane-1-carboxylate oxid GRMZM2G332423

B73 RefGen_v3

Gene

Chr10

90448978

90450072

acco4

acco4, ZmACOD

91

ache1

acetylcholinesterase1 GRMZM6G953609

B73 RefGen_v3

Gene

scaffold_ 9

854

ache1

acetylcholinesterase1, AChE, ache1, alpha-L-fucosidase 2 precursor, PCO131316

92

aco1

aconitase1 GRMZM2G020801

B73 RefGen_v3

Gene

Chr4 28147612

28154163

aco1

aco1, aconitase1

electrophoretic mobility; monomeric

93

aco2

aconitase2 GRMZM5G858454

B73 RefGen_v3

Gene

Chr10 96344573

96353240

aco2

aco2, IDP1618, PCO139346

electrophoretic mobility

94

aco3

aconitase3 GRMZM2G009808

B73 RefGen_v3

Gene

Chr9 152030140

152038415

aco3

aco3, aconitase3, pco068697(524)

electrophoretic mobility

95

aco5

aconitase5 GRMZM2G171707

B73 RefGen_v3

Gene

Chr2 203572465

203578306

aco5

aco4, aco5

96

acp1

acid phosphatase1 AC211394.4_FG004

B73 RefGen_v3

Gene

Chr9 95254430

95260811

acp1

acid phosphatase1, acp1, Acph1, Ap1, Phos, purple acid phosphatase

electrophoretic mobility; cytosolic; dimeric

97

acpt1

acyl carrier protein1 GRMZM2G175818

B73 RefGen_v3

Gene

Chr1 206784775

206787442

acpt1

Acl1, acpt1, acyl carrier protein1, gnp_QAE18b02a, gpm276a, IDP812, IDP862, pco060888, pco060888(64)

acyl carrier protein (acp) cDNA, encodes 121 aa polypeptide, contains transit peptide sequence

98

acs1

1-aminocyclopropane-1-carboxylate synt GRMZM2G163015

B73 RefGen_v3

Gene

Chr3 6433703

6435769

acs1

accs1, acs1, ZmACSA

99

1-aminocyclopropane-1-carboxylate synthase2, accs2, ACC synthase2, acs2, ACS47,

acs2 1-aminocyclopropane-1-carboxylate synt GRMZM2G164405 B73 RefGen_v3 Gene Chr2 15900748 15904400 acs2 ZmACS2, ZmACS7

A

B

C

D

E

F

G

H

I

J

K

1

short name (gene_symbol)

long name (gene_name)

gene_model

assembly_version

locus_type

chr

start

end

short name

synonyms (via maizegdb)

description via maizegdb

100

acs3

1-aminocyclopropane-1-carboxylate synt GRMZM2G018006

B73 RefGen_v3

Gene

Chr9

23963178

23966958

acs3

accs3, acs3, ZmACSB

101

1-aminocyclopropane-1-carboxylate synthase6, accs6, ACC synthase6, acs6, ACS65, ZmAcs6,

acs6 1-aminocyclopropane-1-carboxylate synt GRMZM2G054361 B73 RefGen_v3 Gene Chr1 271834818 271837308 acs6 ZmACS6

102

1-aminocyclopropane-1-carboxylate synthase7, accs7, ACC synthase7, ACS50, acs7,

acs7 1-aminocyclopropane-1-carboxylate synt GRMZM5G894619 B73 RefGen_v3 Gene Chr10 136107954 136110772 acs7 PCO143423, PCO143423(757), ZmACS2, ZmAcs7

103

act1

actin1

GRMZM2G126010

B73 RefGen_v3

Gene

Chr8

99906105

99909909

act1

act1, actin 1, bnl(act1), npi368-act1, npi368(act1), PCO080070, phi115

actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115

104

act2 actin2 Zm00001d012277 Zm-B73-REFERENCE-G Gene Chr8 171775071 171778423 act2 act2, actin2, actin-7, CL1968_3k, Maz89

105

adf1

actin depolymerizing factor1

GRMZM2G117603

B73 RefGen_v3

Gene

Chr7

148916447

148917753

adf1

actin depolymerizing factor1, adf1, PCO095832, pco095832(571), ZmABP1

pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors

106

adf2

actin depolymerizing factor2

GRMZM2G097122

B73 RefGen_v3

Gene

Chr2

200140261

200141322

adf2

actin depolymerizing factor2, adf2, pco095832, pco095832(571), ZmABP2

pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors

107

adf3

actin depolymerizing factor3

GRMZM2G060702

B73 RefGen_v3

Gene

Chr1

293239343

293243048

adf3

ABP3, actin depolymerizing factor3, adf3, ADF3, pco115125(102), pco115125a, ZmABP3, ZmADF3

pollen; expressed in E. coli; two copies detected in Southerns and by one overgo (PCO115125a in ctg64, 1L; PCO115125b in ctg204, 5S), which are syntenous regions.

108

adf5

actin depolymerizing factor5

GRMZM2G077942

B73 RefGen_v3

Gene

Chr1

32872877

32876200

adf5

actin depolymerizing factor5, adf5, pco091760, pco091760(14), rs128410876 , rs131232694 , umc1044, umc1073

109

adh1

alcohol dehydrogenase1

GRMZM2G442658

B73 RefGen_v3

Gene

Chr1

274050254

274054148

adh1

IDP35, magi75238, npi21-adh1, npi21(adh1), PCO141653, rgpc496a(adh), umc1726, umc(adh1)

electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726

110

adh2

alcohol dehydrogenase2

GRMZM2G098346

B73 RefGen_v3

Gene

Chr4

13409584

13412986

adh2

adh2, alcohol dehydrogenase2, nc004, npi228-adh2, phi021, rgpc496b(adh), umc200a, umc200a(adh2)

electrophoretic mobility, null alleles are known; dimeric, intra/interlocus hybrid bands occur; SSRs nc004, phi021

111

adk1

adenylate kinase1

GRMZM2G178192

B73 RefGen_v3

Gene

Chr6

2450158

2455264

adk1

adenylate kinase1, adk1, pco088037(462), pco088037a

electrophoretic mobility; plastidial

112

adss1

adenylosuccinate synthetase

GRMZM2G119852

B73 RefGen_v3

Gene

Chr1

15773077

15777890

adss1

adenylosuccinate synthetase, ads1, adss1, CL2010_1, pza02094

113

adt6

arogenate dehydratase6

GRMZM2G437912

B73 RefGen_v3

Gene

Chr2

59667646

59669581

adt6

adt6

114

adxr1 adrenodoxin reductase1 Zm00001d053301 Zm-B73-REFERENCE-G Gene Chr4 225026663 225038512 adxr1 pco114328(55)

115

ae1

amylose extender1

GRMZM2G032628

B73 RefGen_v3

Gene

Chr5

168492139

168509225

ae1

ae1, amylose extender1, AY109532, CL1742_1, ha1, high amylose1, rs131175699, rs131175700, Sbe, sbe2, ss196416186, ss196416189, starch branching enzyme2

glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes

116

afd1

absence of first division1

GRMZM2G059037

B73 RefGen_v3

Gene

Chr6

166795461

166827341

afd1

absence of first division1, afd1, REC8, si618011B05, si618011b05(525)

male and female sterility; early meiosis

117

agal1

alpha-galactosidase1

GRMZM2G095126

B73 RefGen_v3

Gene

Chr1

228378444

228381659

agal1

agal1, CL6071_1, CL6071_1(71), phi037, phi038, phi039, rs131860003, umc1013, umc128a, umc128(aga), umc128b

Entrez Gene relates to alpha-galactosidase 1 (AGAL) of Arabidopsis

118

ago1

argonaute1

GRMZM2G162525

B73 RefGen_v3

Gene

Chr8

134439555

134444960

ago1

ago1, ago113, argonaute1, cl857_3(631), cl857_3b, gpm630

Proposed to interact with small RNAs in dorsiventral leaf patterning

119

ago101

argonaute101

AC189879.3_FG003

B73 RefGen_v3

Gene

Chr9

87408375

87414276

ago101

AGO10a, gpm721

120

ago104

argonaute104

GRMZM2G141818

B73 RefGen_v3

Gene

Chr6

168642369

168650358

ago104

ago104, AGO4b, argonaute104, dnr4

121

ago105

argonaute105

GRMZM2G089743

B73 RefGen_v3

Gene

Chr3

43646012

43657336

ago105

CL881_1

122

ago108

argonaute108

GRMZM2G461936

B73 RefGen_v3

Gene

Chr5

13611800

13618698

ago108

ago108, ago5a

123

ago10b

argonaute10b

GRMZM2G079080

B73 RefGen_v3

Gene

Chr6

103286236

103293200

ago10b

ago10b, argonaute PNH1-like

124

ago18a

argonaute18a

GRMZM2G105250

B73 RefGen_v3

Gene

Chr2

199510528

199516085

ago18a

ago18a, argonaute 18-like, phm7953, PZA02533, rs131980012, ss196415237

125

ago18b

argonaute18b

GRMZM2G457370

B73 RefGen_v3

Gene

Chr1

250132189

250137737

ago18b

ago18b, cl909_1, cl909_1(82), rs128929565 , rs131877871

126

ago1a

argonaute1a

GRMZM2G441583

B73 RefGen_v3

Gene

Chr6

43253105

43261555

ago1a

ago1a, argonaute 1B-like, ZmAGO1a

Ortholog of Arabidopsis ago1

127

ago1b

argonaute1b

AC209206.3_FG011

B73 RefGen_v3

Gene

Chr10

137506877

137513415

ago1b

ago1b, argonaute 1B-like, ZmAGO1b

Ortholog of Arabidopsis ago1

128

ago1c

argonaute1c

GRMZM2G039455

B73 RefGen_v3

Gene

Chr2

17563301

17573156

ago1c

ago1c, ZmAGO1c

Ortholog of Arabidopsis ago1

129

ago1d

argonaute1d

GRMZM2G361518

B73 RefGen_v3

Gene

Chr5

64791077

64796881

ago1d

ago1d, argonaute 1D-like, ZmAGO1d, ZmAGO1f

Ortholog of Arabidopsis ago1

130

ago2a

argonaute2a

GRMZM2G007791

B73 RefGen_v3

Gene

Chr2

9973816

9981340

ago2a

ago2a

131

ago2b

argonaute2b

GRMZM2G354867

B73 RefGen_v3

Gene

Chr10

141823070

141828449

ago2b

ago2b, argonaute 2-like

132

ago4a

argonaute4a

GRMZM2G589579

B73 RefGen_v3

Gene

Chr8

2511463

2518808

ago4a

ago4a

133

ago5b

argonaute5b

GRMZM2G059033

B73 RefGen_v3

Gene

Chr2

233385077

233392000

ago5b

ago5b

134

ago5c

argonaute5c

GRMZM2G123063

B73 RefGen_v3

Gene

Chr5

4001278

4009529

ago5c

ago5c, argonaute MEL1-like, MEIOSIS ARRESTED AT LEPTOTENE 1 (mel1) ortholog

135

ago6

argonaute6

GRMZM2G347402

B73 RefGen_v3

Gene

Chr7

72044775

72053779

ago6

ago6

136

agp1

ADP glucose pyrophosphorylase small s GRMZM2G106213

B73 RefGen_v3

Gene

Chr2

174023583

174034507

agp1

ADP glucose pyrophosphorylase small subunit embryo 1, agp1, agp2, agpsemzm, AY105915, PCO131593, sc237, ufg2, ufg2(agp2), ufg(agp2)

embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product

137

agp2

ADP glucose pyrophosphorylase2 GRMZM2G027955

B73 RefGen_v3

Gene

Chr6

166787452

166793059

agp2

gpm779, L2, pco103001, PHM5361, PZA00910, rs131175777, rs131175778, sc236,

ss196416505, ss196416507, ufg(agp1)

embryo specific counterpart to sh2

138

agpll1 ADP glucose pyrophosphorylase large suGRMZM2G391936 B73 RefGen_v3 Gene Chr1 273514151 273518985 agpll1 AGPL4, agpll1, agpllzm, ZmagpL1

139

agpll2 ADP glucose pyrophosphorylase large suGRMZM2G144002 B73 RefGen_v3 Gene Chr7 23769242 23780203 agpll2 AGPL, AGPL3, agpll2

140

agpsl1

ADP glucose pyrophosphorylase small s GRMZM2G163437

B73 RefGen_v3

Gene

Chr1

221701404

221705997

agpsl1

bnl17.15b, bnl17.15b(agp), bnl17.15b(bt2), btl1, btl2, gnp_QAN9g11, gpm377, gsy60b(bt2), gsy61(btl2), L2, sc61, SC61B13, siS72425, sis72425(71)

leaf-specific

141

agrr21

GRMZM2G302639

B73 RefGen_v3

Gene

Chr8

172961620

172964067

agrr21

agrr21, AY110127, CL4812_1, PZA02281, rs131175916, ss196417076

NCBI: protein CURVATURE THYLAKOID 1C, chloroplastic

142

ahh1

adenosyl homocysteine hydrolase1 GRMZM2G015295

B73 RefGen_v3

Gene

Chr4

21158461

21161610

ahh1

gpm544a, IDP38, PCO113569, pco113569a, rz900a(ahh), rz900(ahh), TIDP3741, uaz145,

UAZ145(AhCH), uaz145(ahh), uaz145(gfu)

endosperm cDNA 5C01H11 (uaz145) similar to plant activated methyl cycle enzyme

143

AI714808 GRMZM2G005346 B73 RefGen_v3 Gene Chr2 47788105 47793199 AI714808 similar to Arabidopsis protein phosphatase methylesterase 1

144

AI861369 GRMZM6G177089 B73 RefGen_v3 Gene Chr2 187273065 187274870 AI861369 similar to B. distachyon PREDICTED: receptor-like protein 2-like

145

aic1

auxin import carrier1 GRMZM2G129413

B73 RefGen_v3

Gene

Chr1

119659886

119663853

aic1

aic1, aux1, auxin import carrier1, CL468_2, cl468_2(41), Like Auxin-Resistant 2 (ZmLAX2), umc1689, ZmAUX1

cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.

146

ak1

Adenylyl-sulfate kinase1 GRMZM2G061234

B73 RefGen_v3

Gene

Chr7

159799011

159812272

ak1

adenosine-5'-phosphosulfate kinase, Adenylyl-sulfate kinase1, ak1, CL95_-2b

147

ak2

ankyrin repeat protein2 GRMZM2G019838

B73 RefGen_v3

Gene

Chr4

239494965

239497297

ak2

ak2, Ankyrin repeat domain-containing protein EMB506 chloroplastic, pco138649, pco138649(366), PZA01243

148

akh2

aspartate kinase homoserine dehydrogenGRMZM2G104546

B73 RefGen_v3

Gene

Chr2

173486913

173506976

akh2

akh2, AK-HSDH2, aspartate kinase homoserine dehydrogenase2, CL2352_-1a

cDNA sequence 75% homologous to carrot threonine sensitive AK-HSDH bifunctional enzyme

A

B

C

D

E

F

G

H

I

J

K

1

short name (gene_symbol)

long name

(gene_name) gene_model

assembly_version locus_type

chr

start

end

short name

synonyms (via maizegdb) description via maizegdb

149

akin1

AKINbetagamma-1 protein kinase GRMZM2G047774

B73 RefGen_v3

Gene

Chr1

299540824

299549015

akin1

akin1, AKINbetagamma-1 protein kinase, CL367_1, csu1114, gnp_QBB7c06a, gpm434a

150

akr1

aldo/keto reductase AKR1 GRMZM2G052812

B73 RefGen_v3

Gene

Chr6

64079621

64110792

akr1

akr1, auxin induced protein homolog1, csu190, csu190(gfu), In2-2, pco148860, saf2, safener

induced2, TIDP3456 leaf cDNA csu190, similar to auxin-induced protein

151

al9

aleurone9 GRMZM2G091054

B73 RefGen_v3

Gene

Chr8

171118734

171119464

al9

al9, al-9, aleurone9 aleurone specific cDNA, unknown function

152

ald1

aldolase1 GRMZM2G057823

B73 RefGen_v3

Gene

Chr3

165765568

165768179

ald1

cytosolic aldolase; cDNA and genomic clones; Southern blots give single or double band; ald1, aldolase, aldolase1, fructose-bisphosphate aldolase cytoplasmic isozyme promoter functional in transient expression assay

153

ald2

aldolase2 GRMZM2G066024

B73 RefGen_v3

Gene

Chr8

162856704

162859417

ald2

ald2, aldolase2, gnp_QAM23g02, gpm362, umc216(ald1) second aldolase locus initially found by RFLP mapping using an ald1 probe

154

aldh2

aldehyde dehydrogenase2 GRMZM2G125268

B73 RefGen_v3

Gene

Chr4

165996358

165999622

aldh2

complement the ALDH deficient E. coli mutant; mitochondrial location inferred from presence of

aldehyde dehydrogenase2, aldh2, ALDH2B6, rf2b leader sequence

155

aldh3

aldehyde dehydrogenase3 GRMZM2G071021

B73 RefGen_v3

Gene

Chr3

221771183

221775333

aldh3

aldehyde dehydrogenase 3, ALDH2C2, aldh3, IDP10, IDP9, rf2c cDNA sequence similar to rf2; complements E. coli JA111 with defective ALDH

156

aldh5

aldehyde dehydrogenase5 GRMZM2G097706

B73 RefGen_v3

Gene

Chr3

221783373

221791498

aldh5

aldehyde dehydrogenase5, ALDH2C3, aldh5, PCO073335, rf2d, rf2d1 cDNA similar to rf2 (prf2d-exprA7); complements E. coli

157

alf1

Alfin-like-transcription factor 1 GRMZM2G148810

B73 RefGen_v3

Gene

Chr6

124888239

124892792

alf1

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL9 sequence v2 gene models.

158

alf10

Alfin-like-transcription factor 10 GRMZM2G050495

B73 RefGen_v3

Gene

Chr10

119722635

119728067

alf10

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL18 sequence v2 gene models.

159

alf11

Alfin-like-transcription factor 11 GRMZM2G158918

B73 RefGen_v3

Gene

Chr8

102976534

102982864

alf11

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL13 sequence v2 gene models.

160

alf12

Alfin-like-transcription factor 12 GRMZM5G893976

B73 RefGen_v3

Gene

Chr8

15276414

15280931

alf12

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL12 sequence v2 gene models.

161

alf13

Alfin-like-transcription factor 13 GRMZM2G080917

B73 RefGen_v3

Gene

Chr3

170149613

170154226

alf13

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

pco073257a, ZmAL4 sequence v2 gene models.

162

alf14

Alfin-like-transcription factor 14 GRMZM2G156088

B73 RefGen_v3

Gene

Chr10

119489514

119496893

alf14

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL17 sequence v2 gene models.

163

alf15

Alfin-like-transcription factor 15 AC225147.4_FG003

B73 RefGen_v3

Gene

Chr1

292952249

292956375

alf15

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL1 sequence v2 gene models.

164

alf16

Alfin-like-transcription factor 16 GRMZM2G016564

B73 RefGen_v3

Gene

Chr10

119517572

119518319

alf16

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.

165

alf17

Alfin-like-transcription factor 17 GRMZM2G110952

B73 RefGen_v3

Gene

Chr5

2576260

2595158

alf17

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL7 sequence v2 gene models.

166

alf18

Alfin-like-transcription factor 18 GRMZM2G008259

B73 RefGen_v3

Gene

Chr4

11403566

11428284

alf18

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

alf18, AY110398, CL736_1, PZA02358, umc31a, ZmAL5 sequence v2 gene models.

167

alf19

Alfin-like-transcription factor 19 GRMZM2G047316

B73 RefGen_v3

Gene

Chr2

158912747

158917610

alf19

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL2 sequence v2 gene models.

168

alf2

Alfin-like-transcription factor 2 GRMZM2G063864

B73 RefGen_v3

Gene

Chr5

174455049

174458989

alf2

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

chr111 chromatin complex subunit A, ZmAL8 sequence v2 gene models.

169

alf3

Alfin-like-transcription factor 3 GRMZM2G038066

B73 RefGen_v3

Gene

Chr7

165038048

165044961

alf3

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL11 sequence v2 gene models.

170

alf4

Alfin-like-transcription factor 4 GRMZM2G153087

B73 RefGen_v3

Gene

Chr3

135934895

135940205

alf4

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

alf4, TIDP3057, ZmAL3 sequence v2 gene models.

171

alf5

Alfin-like-transcription factor 5 GRMZM2G016817

B73 RefGen_v3

Gene

Chr6

147835864

147843229

alf5

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL10 sequence v2 gene models.

172

alf6

Alfin-like-transcription factor 6 GRMZM2G115424

B73 RefGen_v3

Gene

Chr10

31315303

31320114

alf6

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL16 sequence v2 gene models.

173

alf7

Alfin-like-transcription factor 7 GRMZM2G107807

B73 RefGen_v3

Gene

Chr4

120648398

120651921

alf7

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL6 sequence v2 gene models.

174

alf8

Alfin-like-transcription factor 8 GRMZM2G172001

B73 RefGen_v3

Gene

Chr8

164293635

164297965

alf8

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL15 sequence v2 gene models.

175

alf9

Alfin-like-transcription factor 9 GRMZM2G017142

B73 RefGen_v3

Gene

Chr8

125066160

125069152

alf9

(Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome

ZmAL14 sequence v2 gene models.

176

algt1

alanine--glyoxylate aminotransferase1 GRMZM2G030571

B73 RefGen_v3

Gene

Chr1

56676074

56678959

algt1

alanine--glyoxylate aminotransferase1, algt1, alt6, rs128445321

177

alp1

aluminum-induced protein homolog1 GRMZM2G003762

B73 RefGen_v3

Gene

Chr10

4676400

4679041

alp1

ALP, alp1, csu359(alp), csu359(gfu), csu577, pco130572(712), PCO130572c leaf cDNA csu359 similar to wheat aluminum-induced protein, GenBank accession L28008

178

als1

acetolactate synthase1 GRMZM2G143357

B73 RefGen_v3

Gene

Chr4

96832612

96834891

als1

acetolactate synthase1, AHAS109, als1, Als*-109, bnl#(als), dup, dup(als1), MALSb, PZA03231, sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide rs129762878, rs55622883 , ss196415776 inhibition kinetics

179

als2

acetolactate synthase2 GRMZM2G143008

B73 RefGen_v3

Gene

Chr5

164024379

164026683

als2

dup(als2) probe. sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered acetolactate synthase2, als1, Als*-108, als2, bnl#(als), dup, dup(als2), MALSa, XA-17 herbicide inhibition kinetics

180

alt10

alanine aminotransferase10 GRMZM2G124963

B73 RefGen_v3

Gene

Chr2

212180526

212185824

alt10

alt10, idp136, rs131180249, rs131993455 putative alanine aminotransferase weakly expressed in seedling leaf (Tausta et al 2014)

181

alt4

L-alanine:2-oxoglutarate aminotransferasGRMZM2G088064

B73 RefGen_v3

Gene

Chr5

37251082

37256273

alt4

the relationship between alt4 and previously reported genes alt1, alt2 or alt3 is not clear as AlaAT, alt4, L-alanine:2-oxoglutarate aminotransferase4, rz892b(alt), uaz158, uaz158(alt) sequences for the latter were not published;

182

alt5

alanine aminotransferase5 GRMZM2G088028

B73 RefGen_v3

Gene

Chr5

37248072

37250198

alt5

AlaAT, alanine aminotransferase5, alt5, CL2764_1, CL2764_1(562), gnp_AW066742, gpm149, putative alanine aminotransferase; found in embryo (Davidson 2011), not reported in seedling PCO123780, PCO123780(562) leaf (Tausta et al 2014)

183

alt7

alanine aminotransferase7 GRMZM2G120563

B73 RefGen_v3

Gene

Chr7

1309331

1321760

alt7

AlaAT, alanine aminotransferase7, alt7, CL1839_2(547), CL1839_2b, PCO087866(528),

PCO087866b, rs131591583 bundle sheath alanine transasminase; see also alt8, alt9

184

alt8

alanine amino transferase8 GRMZM5G840582

B73 RefGen_v3

Gene

Chr2

236204010

236208701

alt8

AlaAT, alanine amino transferase8, alt8, rs129259495, rs129259505, rs129259506 bundle sheath alanine transaminase; see also alt7 and alt9

185

alt9

alanine aminotransferase9 GRMZM2G053999

B73 RefGen_v3

Gene

Chr7

165787766

165790666

alt9

AlaAT, alanine aminotransferase9, alt9, pco113489, pco113489(579), rs130683341 putative leaf alanine transminase

186

am1

ameiotic1 GRMZM5G883855

B73 RefGen_v3

Gene

Chr5

16109038