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An Introduction to Multiple Sequence Alignment -- and the T-Coffee Shop. Beyond just aligning sequences: How good can you make your alignment, and so what?

A chapter in the forthcoming Bioinformatics for Systems Biology, edited by Stephen A Krawetz, to be released by The Humana Press Inc., Totowa, N.J. U.S.A.

  • The Manuscript (PDF including all figures and tables inline)


Multiple Sequence Alignment and Analysis: A two part introduction and practical guide to the art and science of comparative genomics.

Chapters three and four in Computational Genomics: Theory and Application, (2004) edited by Richard P. Grant, Horizon Scientific Press, Norfolk U.K.

author: Steven M. Thompson
Florida State University
School of Computational Science
Tallahassee, Florida 32306-4120
telephone: 850-644-1010
fax: 850-644-0098

corresponding address:
Steve Thompson
BioInfo 4U
2538 Winnwood Circle
Valdosta, Georgia, 31601-7953
telephone: 229-249-9751

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© 2007 Steven M. Thompson, stevet@bio.fsu.edu
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